logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000002738_1|CGC3

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000002738_00045
Non-reducing end alpha-L-arabinofuranosidase BoGH43A
CAZyme 50409 51959 - GH43_12| GH43
MGYG000002738_00046
hypothetical protein
CAZyme 51980 53692 - CE17
MGYG000002738_00047
Reducing end xylose-releasing exo-oligoxylanase
CAZyme 53703 54848 - GH8
MGYG000002738_00048
Non-reducing end alpha-L-arabinofuranosidase BoGH43A
CAZyme 54878 56356 - CBM22| CE1| GH43_10| GH43
MGYG000002738_00049
L-arabinose transport system permease protein AraQ
TC 56360 57244 - 3.A.1.1.29
MGYG000002738_00050
putative multiple-sugar transport system permease YteP
TC 57266 58225 - 3.A.1.1.29
MGYG000002738_00051
hypothetical protein
TC 58301 59974 - 3.A.1.1.29
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is xylan

Protein ID eCAMI subfam CAZyme substrate
MGYG000002738_00045 GH43_e51|3.2.1.55|3.2.1.37 xylan
MGYG000002738_00046
MGYG000002738_00047 GH8_e30|3.2.1.8|3.2.1.156 xylan
MGYG000002738_00048 GH43_e100|CE1_e40|CBM22_e16|3.2.1.8|3.2.1.55|3.1.1.73 xylan

Substrate predicted by dbCAN-PUL is xylan download this fig


Genomic location